opensoundscape
v0.7.1
OpenSoundscape
Installation
Mac and Linux
Windows
Contributors
Jupyter
Tutorials
Audio and spectrograms
Manipulating audio annotations
Prediction with pre-trained CNNs
Beginner friendly training and prediction with CNNs
Preprocessing audio samples with OpenSoundscape
Advanced CNN training
RIBBIT Pulse Rate model demonstration
API Documentation
Audio and Spectrograms
Machine Learning
Preprocessing
Signal Processing
Misc tools
Index
Index
Modules
opensoundscape
Docs
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Index
Edit on GitHub
Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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L
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M
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O
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P
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V
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X
_
__getitem__() (opensoundscape.torch.safe_dataset.SafeDataset method)
_build_index() (opensoundscape.torch.safe_dataset.SafeDataset method)
_safe_get_item() (opensoundscape.torch.safe_dataset.SafeDataset method)
A
Action (class in opensoundscape.preprocess.actions)
alexnet() (in module opensoundscape.torch.architectures.cnn_architectures)
amplitude() (opensoundscape.spectrogram.Spectrogram method)
apply_activation_layer() (in module opensoundscape.torch.models.utils)
Audio (class in opensoundscape.audio)
audio_sample_rate (opensoundscape.spectrogram.Spectrogram attribute)
AudioClipLoader (class in opensoundscape.preprocess.actions)
AudioFileDataset (class in opensoundscape.torch.datasets)
audiomoth_start_time() (in module opensoundscape.audiomoth)
AudioOutOfBoundsError
AudioSplittingDataset (class in opensoundscape.torch.datasets)
AudioTrim (class in opensoundscape.preprocess.actions)
B
bandpass() (opensoundscape.annotations.BoxedAnnotations method)
(opensoundscape.audio.Audio method)
(opensoundscape.spectrogram.Spectrogram method)
bandpass_filter() (in module opensoundscape.audio_tools)
BaseAction (class in opensoundscape.preprocess.actions)
BaseArchitecture (class in opensoundscape.torch.architectures.utils)
BaseModule (class in opensoundscape.torch.models.utils)
BasePreprocessor (class in opensoundscape.preprocess.preprocessors)
BCEWithLogitsLoss_hot (class in opensoundscape.torch.loss)
binarize() (in module opensoundscape.helpers)
binary_predictions() (in module opensoundscape.metrics)
bn_common_to_sci() (in module opensoundscape.taxa)
bound() (in module opensoundscape.helpers)
BoxedAnnotations (class in opensoundscape.annotations)
butter_bandpass() (in module opensoundscape.audio_tools)
C
calc_speed_of_sound() (in module opensoundscape.localization)
calculate_pulse_score() (in module opensoundscape.ribbit)
cas_dataloader() (in module opensoundscape.torch.models.utils)
categorical_to_one_hot() (in module opensoundscape.annotations)
class_counts() (opensoundscape.torch.datasets.AudioFileDataset method)
ClassAwareSampler (class in opensoundscape.torch.sampling)
clipping_detector() (in module opensoundscape.audio_tools)
CNN (class in opensoundscape.torch.models.cnn)
collate_lists_of_audio_clips() (in module opensoundscape.torch.models.utils)
combine() (in module opensoundscape.annotations)
common_to_sci() (in module opensoundscape.taxa)
CompositeArchitecture (class in opensoundscape.torch.architectures.utils)
convert_labels() (opensoundscape.annotations.BoxedAnnotations method)
convolve_file() (in module opensoundscape.audio_tools)
CrossEntropyLoss_hot (class in opensoundscape.torch.loss)
cwt_peaks() (in module opensoundscape.signal)
D
decibel_limits (opensoundscape.spectrogram.Spectrogram attribute)
densenet121() (in module opensoundscape.torch.architectures.cnn_architectures)
detect_peak_sequence_cwt() (in module opensoundscape.signal)
diff() (in module opensoundscape.annotations)
duration() (opensoundscape.audio.Audio method)
(opensoundscape.spectrogram.Spectrogram method)
E
eval() (opensoundscape.torch.models.cnn.CNN method)
extend() (opensoundscape.audio.Audio method)
F
file_name() (in module opensoundscape.helpers)
find_accel_sequences() (in module opensoundscape.signal)
forward() (opensoundscape.preprocess.preprocessors.BasePreprocessor method)
freeze_params() (in module opensoundscape.torch.architectures.cnn_architectures)
freq_mask() (in module opensoundscape.preprocess.tensor_augment)
frequencies (opensoundscape.spectrogram.Spectrogram attribute)
frequency2scale() (in module opensoundscape.signal)
frequency_mask() (in module opensoundscape.preprocess.actions)
from_audio() (opensoundscape.spectrogram.MelSpectrogram class method)
(opensoundscape.spectrogram.Spectrogram class method)
from_bytesio() (opensoundscape.audio.Audio class method)
from_file() (opensoundscape.audio.Audio class method)
from_raven_file() (opensoundscape.annotations.BoxedAnnotations class method)
G
generate_clip_times_df() (in module opensoundscape.helpers)
get_args() (in module opensoundscape.preprocess.utils)
get_batch() (in module opensoundscape.torch.models.utils)
get_reqd_args() (in module opensoundscape.preprocess.utils)
get_species_list() (in module opensoundscape.taxa)
global_one_hot_labels() (opensoundscape.annotations.BoxedAnnotations method)
H
head() (opensoundscape.torch.datasets.AudioFileDataset method)
hex_to_time() (in module opensoundscape.helpers)
I
image_to_tensor() (in module opensoundscape.preprocess.actions)
ImbalancedDatasetSampler (class in opensoundscape.torch.sampling)
inception_v3() (in module opensoundscape.torch.architectures.cnn_architectures)
InceptionV3 (class in opensoundscape.torch.models.cnn)
inrange() (in module opensoundscape.helpers)
insert_action() (opensoundscape.preprocess.preprocessors.BasePreprocessor method)
is_index_built (opensoundscape.torch.safe_dataset.SafeDataset attribute)
isNan() (in module opensoundscape.helpers)
J
jitter() (in module opensoundscape.helpers)
L
limit_db_range() (opensoundscape.spectrogram.Spectrogram method)
linear_scale() (in module opensoundscape.helpers)
(opensoundscape.spectrogram.Spectrogram method)
load() (opensoundscape.torch.architectures.resnet.ResNetArchitecture method)
load_channels_as_audio() (in module opensoundscape.audio)
load_model() (in module opensoundscape.torch.models.cnn)
load_outdated_model() (in module opensoundscape.torch.models.cnn)
load_weights() (opensoundscape.torch.models.cnn.CNN method)
localize() (in module opensoundscape.localization)
loop() (opensoundscape.audio.Audio method)
lorentz_ip() (in module opensoundscape.localization)
M
make_clip_df() (in module opensoundscape.helpers)
MelSpectrogram (class in opensoundscape.spectrogram)
min_max_scale() (in module opensoundscape.helpers)
(opensoundscape.spectrogram.Spectrogram method)
mixdown_with_delays() (in module opensoundscape.audio_tools)
modify_resnet() (in module opensoundscape.torch.architectures.cnn_architectures)
multi_target_metrics() (in module opensoundscape.metrics)
N
net_amplitude() (opensoundscape.spectrogram.Spectrogram method)
O
one_hot_clip_labels() (opensoundscape.annotations.BoxedAnnotations method)
one_hot_labels_like() (opensoundscape.annotations.BoxedAnnotations method)
one_hot_labels_on_time_interval() (in module opensoundscape.annotations)
one_hot_to_categorical() (in module opensoundscape.annotations)
opensoundscape.annotations (module)
opensoundscape.audio (module)
opensoundscape.audio_tools (module)
opensoundscape.audiomoth (module)
opensoundscape.data_selection (module)
opensoundscape.helpers (module)
opensoundscape.localization (module)
opensoundscape.metrics (module)
opensoundscape.preprocess.actions (module)
opensoundscape.preprocess.img_augment (module)
opensoundscape.preprocess.preprocessors (module)
opensoundscape.preprocess.tensor_augment (module)
opensoundscape.preprocess.utils (module)
opensoundscape.ribbit (module)
opensoundscape.signal (module)
opensoundscape.spectrogram (module)
opensoundscape.taxa (module)
opensoundscape.torch.architectures.cnn_architectures (module)
opensoundscape.torch.architectures.resnet (module)
opensoundscape.torch.architectures.utils (module)
opensoundscape.torch.datasets (module)
opensoundscape.torch.grad_cam (module)
opensoundscape.torch.loss (module)
opensoundscape.torch.models.cnn (module)
opensoundscape.torch.models.utils (module)
opensoundscape.torch.safe_dataset (module)
opensoundscape.torch.sampling (module)
OpsoLoadAudioInputError
overlap() (in module opensoundscape.helpers)
overlap_fraction() (in module opensoundscape.helpers)
overlap_samples (opensoundscape.spectrogram.Spectrogram attribute)
Overlay (class in opensoundscape.preprocess.actions)
overlay() (in module opensoundscape.preprocess.actions)
P
parse_audiomoth_metadata() (in module opensoundscape.audiomoth)
plot() (opensoundscape.spectrogram.MelSpectrogram method)
(opensoundscape.spectrogram.Spectrogram method)
predict() (opensoundscape.torch.models.cnn.CNN method)
PreprocessingError
R
reduce_loss() (in module opensoundscape.torch.loss)
remove_action() (opensoundscape.preprocess.preprocessors.BasePreprocessor method)
resample() (in module opensoundscape.data_selection)
(opensoundscape.audio.Audio method)
ResampleLoss (class in opensoundscape.torch.loss)
rescale_features() (in module opensoundscape.helpers)
resnet101() (in module opensoundscape.torch.architectures.cnn_architectures)
resnet152() (in module opensoundscape.torch.architectures.cnn_architectures)
resnet18() (in module opensoundscape.torch.architectures.cnn_architectures)
resnet34() (in module opensoundscape.torch.architectures.cnn_architectures)
resnet50() (in module opensoundscape.torch.architectures.cnn_architectures)
ResNetArchitecture (class in opensoundscape.torch.architectures.resnet)
ResNetFeature (class in opensoundscape.torch.architectures.resnet)
ribbit() (in module opensoundscape.ribbit)
run_command() (in module opensoundscape.helpers)
S
SafeDataset (class in opensoundscape.torch.safe_dataset)
sample() (opensoundscape.torch.datasets.AudioFileDataset method)
save() (opensoundscape.audio.Audio method)
save_weights() (opensoundscape.torch.models.cnn.CNN method)
scale_tensor() (in module opensoundscape.preprocess.actions)
scaling (opensoundscape.spectrogram.Spectrogram attribute)
sci_to_bn_common() (in module opensoundscape.taxa)
sci_to_xc_common() (in module opensoundscape.taxa)
separate_resnet_feat_clf() (in module opensoundscape.torch.models.cnn)
set() (opensoundscape.preprocess.actions.BaseAction method)
show_tensor() (in module opensoundscape.preprocess.utils)
show_tensor_grid() (in module opensoundscape.preprocess.utils)
sigmoid() (in module opensoundscape.helpers)
silence_filter() (in module opensoundscape.audio_tools)
single_target_metrics() (in module opensoundscape.metrics)
Spectrogram (class in opensoundscape.spectrogram)
spectrogram (opensoundscape.spectrogram.Spectrogram attribute)
SpectrogramPreprocessor (class in opensoundscape.preprocess.preprocessors)
spectrum() (opensoundscape.audio.Audio method)
split() (opensoundscape.audio.Audio method)
split_and_save() (opensoundscape.audio.Audio method)
squeezenet1_0() (in module opensoundscape.torch.architectures.cnn_architectures)
subset() (opensoundscape.annotations.BoxedAnnotations method)
T
tensor_add_noise() (in module opensoundscape.preprocess.actions)
tensor_binary_predictions() (in module opensoundscape.torch.models.utils)
thresholded_event_durations() (in module opensoundscape.signal)
time_mask() (in module opensoundscape.preprocess.actions)
(in module opensoundscape.preprocess.tensor_augment)
time_split() (in module opensoundscape.preprocess.img_augment)
time_to_sample() (opensoundscape.audio.Audio method)
time_warp() (in module opensoundscape.preprocess.tensor_augment)
times (opensoundscape.spectrogram.Spectrogram attribute)
to_image() (opensoundscape.spectrogram.Spectrogram method)
to_raven_file() (opensoundscape.annotations.BoxedAnnotations method)
torch_color_jitter() (in module opensoundscape.preprocess.actions)
torch_random_affine() (in module opensoundscape.preprocess.actions)
train() (opensoundscape.torch.models.cnn.CNN method)
travel_time() (in module opensoundscape.localization)
trim() (opensoundscape.annotations.BoxedAnnotations method)
(opensoundscape.audio.Audio method)
(opensoundscape.spectrogram.Spectrogram method)
trim_audio() (in module opensoundscape.preprocess.actions)
U
unique_labels() (opensoundscape.annotations.BoxedAnnotations method)
upsample() (in module opensoundscape.data_selection)
use_resample_loss() (in module opensoundscape.torch.models.cnn)
V
vgg11_bn() (in module opensoundscape.torch.architectures.cnn_architectures)
W
weight_reduce_loss() (in module opensoundscape.torch.loss)
window_energy() (in module opensoundscape.audio_tools)
window_length() (opensoundscape.spectrogram.Spectrogram method)
window_samples (opensoundscape.spectrogram.Spectrogram attribute)
window_start_times() (opensoundscape.spectrogram.Spectrogram method)
window_step() (opensoundscape.spectrogram.Spectrogram method)
window_type (opensoundscape.spectrogram.Spectrogram attribute)
X
xc_common_to_sci() (in module opensoundscape.taxa)
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